Computing for Quantum Chemistry
June 2005
The benchmark report (using Gaussian 03, test job # 397) is presented below:
In June 2005, the author was working at Stanford University and visited both
AMD and Intel headoffices.
I was priviledged to be one of the first computational chemists to test the performance of very new
dual-core Opteron -based servers. Many thanks to Ed Gasiorowski (AMD) and Mike Fay (Colfax International) for providing the computer hardware for my benchmark work.
For these tests:
- 1-CPU tests were executed with the other processor(s) idle;
- the same amount of RAM was allocated for the test job (300 MB);
- the IA32L-G03 binary (Revision C.01, from Gaussian, Inc.) was used for the Intel Xeon and AMD Athlon MP computers
and the 64-bit Opteron AM64L-G03 binary (Revision C.02, from Gaussian Inc.) was used for the AMD Opteron workstation;
- the 64-bit SUSE Linux version 9.3 (2.6.11.4-20a-smp) was used for the Opteron server (the 64-bit version of RedHat
Fedora Core 4 Linux (2.6.11-1.1369_FC4smp) is also suitable as an operating system);
the 32-bit RedHat Linux version 9 (2.4.20-8smp) was used for the Intel Xeon and AMD Athlon MP servers;
- the unnecessary daemons and services were removed from RedHat / SUSE Linux installations. No further tuning
of RedHat / SUSE Linux was performed.
For more information about the performance of multicore AMD processors for quantum chemical applications,
you can also refer to the article of Mikhail Kuzminsky in Open Systems (in Russian)
www.sg-chem.net